Protein Information

Protein ZmGBP11
ZmGBP11 is a protein in the GeBP family.
Information
TF Name:	ZmGBP11
Species:	Maize
TF Family:	GeBP
Gene Name(Synonym):	GBPTF11
Uniprot ID:	C4J0B2
Subgenome:	2

Overview of domains present in v5 transcripts
	PF04504
Zm00001eb418630_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d024905	DAPseq	sequence	fimo	position
Zm00001d024905	DAPseq	sequence	fimo	position
Zm00001d024905	ChIPseq	sequence	fimo	position
Zm00001d024905	PChIPseq	sequence	fimo	position

Zm00001eb418630_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

MPPPPTSAPHSLAADDFHTSDTAAAAAGAVVPCAASQPGTNGGKKPAFAFGRVWSEADEVRILEGLAAYAAAHGAEPRRS
QLHAALGGCGLDKSEFTVTEIYEKVRRLRTKYANRRSAGGVPVPAAAGGAGDGDEARKYELSRSIWGDLPLKKVGASHAT
NASGNGNGNANANAAPGTRARRGIEELQGLYPSLASAVEGITDNESLRPVLKRAFQLISDERARQLDAKVKKQRDMEAQM
AVKVTALRNEVLDTLTGSMDCFINDVKYEG

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF04504
PF04504
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard

Expand

CTAGTAGAACATATATATCCTGGTT...

GRMZM2G006871_T01 from maize genome v3

Related TFome: pUT3123

Amino Acid Sequence
Copy to clipboard

MPPPPTSAPHSLAADDFHTSDTAAAAAGAVVPCAASQPGTNGGKKPAFAFGRVWSEADEVRILEGLAAYAAAHGAEPRRS
QLHAALGGCGLDKSEFTVTEIYEKVRRLRTKYANRRSAGGVPVPAAAGGAGDGDEARKYELSRSIWGDLPLKKVGASHAT
NASGNGNGNANANAAPGTRARRGIEELQGLYPSLASAVEGITDNESLRPVLKRAFQLISDERARQLDAKVKKQRDMEAQM
AVKVTALRNEVLDTLTGSMDCFINDVKYEG

Nucleotide Sequence
Copy to clipboard

Expand

GGTGTAGCAACATAAAAGCACTTTA...

Zm00001d024905_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MPPPPTSAPHSLAADDFHTSDTAAAAAGAVVPCAASQPGTNGGKKPAFAFGRVWSEADEVRILEGLAAYAAAHGAEPRRS
QLHAALGGCGLDKSEFTVTEIYEKVRRLRTKYANRRSAGGVPVPAAAGGAGDGDEARKYELSRSIWGDLPLKKVGASHAT
NASGNGNGNANANAAPGTRARRGIEELQGLYPSLASAVEGITDNESLRPVLKRAFQLISDERARQLDAKVKKQRDMEAQM
AVKVTALRNEVLDTLTGSMDCFINDVKYEG

Nucleotide Sequence
Copy to clipboard

Expand

ATGCCGCCGCCGCCGACGAGCGCCC...

Learn About Grassius

Species

Databases

Tools

Help

Protein ZmGBP11

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmGBP11 is the regulator

Interactions where ZmGBP11 is the target
Expand

Zm00001eb418630_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

Nucleotide Sequence
Copy to clipboard

Expand

GRMZM2G006871_T01 from maize genome v3

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

Zm00001d024905_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

About Grassius

Access Data

Tools

Help